HL_7OE0_026

3D structure

PDB id

7OE0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli pre-30S delta rbfA ribosomal subunit class F

Experimental method

ELECTRON MICROSCOPY

Resolution

2.69 Å

Loop

Sequence

GGUCCGGCC

Length

9 nucleotides

Bulged bases

7OE0|1|A|C|1136

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OE0_026 not in the Motif Atlas

Geometric match to HL_8C3A_021

Geometric discrepancy: 0.3961

The information below is about HL_8C3A_021

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_56443.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

7OE0|1|A|G|1133
7OE0|1|A|G|1134
7OE0|1|A|U|1135
7OE0|1|A|C|1136
7OE0|1|A|C|1137
7OE0|1|A|G|1138
7OE0|1|A|G|1139
7OE0|1|A|C|1140
7OE0|1|A|C|1141

Current chains

Chain A

16S rRNA

Nearby chains

Chain I

30S ribosomal protein S9