HL_7OHU_031
3D structure
- PDB id
- 7OHU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL2 expression shut down, population B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- AGCAGAAU
- Length
- 8 nucleotides
- Bulged bases
- 7OHU|1|1|G|2898
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7OHU_031 not in the Motif Atlas
- Homologous match to HL_8C3A_063
- Geometric discrepancy: 0.205
- The information below is about HL_8C3A_063
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_79150.1
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 12
Unit IDs
7OHU|1|1|A|2897
7OHU|1|1|G|2898
7OHU|1|1|C|2899
7OHU|1|1|A|2900
7OHU|1|1|G|2901
7OHU|1|1|A|2902
7OHU|1|1|A|2903
7OHU|1|1|U|2904
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain H
- 60S ribosomal protein L9-A
- Chain b
- Nucleolar GTP-binding protein 1
- Chain r
- Ribosome biogenesis protein NSA2
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