HL_7OI9_033
3D structure
- PDB id
- 7OI9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 3B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- CUAAAAGCAG
- Length
- 10 nucleotides
- Bulged bases
- 7OI9|1|A|A|511
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7OI9_033 not in the Motif Atlas
- Geometric match to HL_5VPO_138
- Geometric discrepancy: 0.3898
- The information below is about HL_5VPO_138
- Detailed Annotation
- Pseudoknot geometry
- Broad Annotation
- Pseudoknot geometry
- Motif group
- HL_78364.1
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 8
Unit IDs
7OI9|1|A|C|506
7OI9|1|A|U|507
7OI9|1|A|A|508
7OI9|1|A|A|509
7OI9|1|A|A|510
7OI9|1|A|A|511
7OI9|1|A|G|512
7OI9|1|A|C|513
7OI9|1|A|A|514
7OI9|1|A|G|515
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain J
- 39S ribosomal protein L11, mitochondrial
- Chain l
- 39S ribosomal protein L54, mitochondrial
Coloring options: