HL_7OSA_013
3D structure
- PDB id
- 7OSA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- AAUGUAAAUACCU
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7OSA_013 not in the Motif Atlas
- Homologous match to HL_8P9A_203
- Geometric discrepancy: 0.1052
- The information below is about HL_8P9A_203
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_05304.3
- Basepair signature
- cWW-cWW-F-F-tSH-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
7OSA|1|18S|A|520
7OSA|1|18S|A|521
7OSA|1|18S|U|522
7OSA|1|18S|G|523
7OSA|1|18S|U|524
7OSA|1|18S|A|525
7OSA|1|18S|A|526
7OSA|1|18S|A|527
7OSA|1|18S|U|528
7OSA|1|18S|A|529
7OSA|1|18S|C|530
7OSA|1|18S|C|531
7OSA|1|18S|U|532
Current chains
- Chain 18S
- 18S rRNA
Nearby chains
- Chain eS24
- 40S ribosomal protein S24
- Chain eS4
- 40S ribosomal protein S4
- Chain uS4
- BJ4_G0026100.mRNA.1.CDS.1
Coloring options: