HL_7OSA_035

3D structure

PDB id

7OSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GAGAAGGGGGCAACUCCAUCUC

Length

22 nucleotides

Bulged bases

7OSA|1|18S|G|1696, 7OSA|1|18S|C|1700, 7OSA|1|18S|A|1701, 7OSA|1|18S|A|1702

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OSA_035 not in the Motif Atlas

Homologous match to HL_8P9A_224

Geometric discrepancy: 0.5821

The information below is about HL_8P9A_224

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_89346.1

Basepair signature

cWW-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F

Number of instances in this motif group

2

Unit IDs

7OSA|1|18S|G|1690
7OSA|1|18S|A|1691
7OSA|1|18S|G|1692
7OSA|1|18S|A|1693
7OSA|1|18S|A|1694
7OSA|1|18S|G|1695
7OSA|1|18S|G|1696
7OSA|1|18S|G|1697
7OSA|1|18S|G|1698
7OSA|1|18S|G|1699
7OSA|1|18S|C|1700
7OSA|1|18S|A|1701
7OSA|1|18S|A|1702
7OSA|1|18S|C|1703
7OSA|1|18S|U|1704
7OSA|1|18S|C|1705
7OSA|1|18S|C|1706
7OSA|1|18S|A|1707
7OSA|1|18S|U|1708
7OSA|1|18S|C|1709
7OSA|1|18S|U|1710
7OSA|1|18S|C|1711

Current chains

Chain 18S

18S rRNA

Nearby chains

Chain eS6

40S ribosomal protein S6