HL_7OSA_040

3D structure

PDB id

7OSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CUUCG

Length

5 nucleotides

Bulged bases

7OSA|1|25S|U|133, 7OSA|1|25S|C|135

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OSA_040 not in the Motif Atlas

Geometric match to HL_5TBW_004

Geometric discrepancy: 0.2519

The information below is about HL_5TBW_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_86929.1

Basepair signature

cWW-F

Number of instances in this motif group

9

Unit IDs

7OSA|1|25S|C|132
7OSA|1|25S|U|133
7OSA|1|25S|U|134
7OSA|1|25S|C|135
7OSA|1|25S|G|136

Current chains

Chain 25S

25S rRNA

Nearby chains

Chain eL15

60S ribosomal protein L15-A

Chain eL37

Ribosomal protein L37

Chain uL29

BJ4_G0044250.mRNA.1.CDS.1