HL_7OSA_056

3D structure

PDB id

7OSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

ACGUGCAAAU

Length

10 nucleotides

Bulged bases

7OSA|1|25S|U|879, 7OSA|1|25S|A|883, 7OSA|1|25S|A|884

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OSA_056 not in the Motif Atlas

Homologous match to HL_8P9A_132

Geometric discrepancy: 0.0753

The information below is about HL_8P9A_132

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_88205.2

Basepair signature

cWW-cWS-tSW-F-F

Number of instances in this motif group

7

Unit IDs

7OSA|1|25S|A|876
7OSA|1|25S|C|877
7OSA|1|25S|G|878
7OSA|1|25S|U|879
7OSA|1|25S|G|880
7OSA|1|25S|C|881
7OSA|1|25S|A|882
7OSA|1|25S|A|883
7OSA|1|25S|A|884
7OSA|1|25S|U|885

Current chains

Chain 25S

25S rRNA

Nearby chains

Chain eL37

Ribosomal protein L37

Chain uL22

BJ4_G0005750.mRNA.1.CDS.1

Chain uL3

60S ribosomal protein L3