HL_7OSA_085

3D structure

PDB id

7OSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GUAACUAUGAC

Length

11 nucleotides

Bulged bases

7OSA|1|25S|A|2256

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OSA_085 not in the Motif Atlas

Homologous match to HL_8C3A_049

Geometric discrepancy: 0.2009

The information below is about HL_8C3A_049

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_84702.1

Basepair signature

cWW-F-F-tHW-F-F-F-F

Number of instances in this motif group

4

Unit IDs

7OSA|1|25S|G|2253
7OSA|1|25S|U|2254
7OSA|1|25S|A|2255
7OSA|1|25S|A|2256
7OSA|1|25S|C|2257
7OSA|1|25S|U|2258
7OSA|1|25S|A|2259
7OSA|1|25S|U|2260
7OSA|1|25S|G|2261
7OSA|1|25S|A|2262
7OSA|1|25S|C|2263

Current chains

Chain 25S

25S rRNA

Nearby chains

Chain 18S

Small subunit ribosomal RNA; SSU rRNA

Chain eEF2

Elongation factor 2