HL_7OSM_022
3D structure
- PDB id
- 7OSM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- GAUCAGAUACC
- Length
- 11 nucleotides
- Bulged bases
- 7OSM|1|18S|U|1004
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7OSM_022 not in the Motif Atlas
- Geometric match to HL_4LFB_017
- Geometric discrepancy: 0.1044
- The information below is about HL_4LFB_017
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.5
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
7OSM|1|18S|G|997
7OSM|1|18S|A|998
7OSM|1|18S|U|999
7OSM|1|18S|C|1000
7OSM|1|18S|A|1001
7OSM|1|18S|G|1002
7OSM|1|18S|A|1003
7OSM|1|18S|U|1004
7OSM|1|18S|A|1005
7OSM|1|18S|C|1006
7OSM|1|18S|C|1007
Current chains
- Chain 18S
- 18S rRNA
Nearby chains
- Chain 25S
- Large subunit ribosomal RNA; LSU rRNA
- Chain PSIT
- Transfer RNA; tRNA
- Chain eS26
- 40S ribosomal protein S26
- Chain mRNA
- MRNA
- Chain uS11
- 40S ribosomal protein S14-A
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