HL_7OSM_056
3D structure
- PDB id
- 7OSM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- ACGUGCAAAU
- Length
- 10 nucleotides
- Bulged bases
- 7OSM|1|25S|U|879, 7OSM|1|25S|A|883
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7OSM_056 not in the Motif Atlas
- Homologous match to HL_5TBW_020
- Geometric discrepancy: 0.0781
- The information below is about HL_5TBW_020
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_39334.8
- Basepair signature
- cWW-cWS-tSW-F-F
- Number of instances in this motif group
- 7
Unit IDs
7OSM|1|25S|A|876
7OSM|1|25S|C|877
7OSM|1|25S|G|878
7OSM|1|25S|U|879
7OSM|1|25S|G|880
7OSM|1|25S|C|881
7OSM|1|25S|A|882
7OSM|1|25S|A|883
7OSM|1|25S|A|884
7OSM|1|25S|U|885
Current chains
- Chain 25S
- 25S rRNA
Nearby chains
- Chain eL37
- Ribosomal protein L37
- Chain uL22
- BJ4_G0005750.mRNA.1.CDS.1
- Chain uL3
- 60S ribosomal protein L3
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