HL_7OW7_058

3D structure

PDB id

7OW7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

EIF6-bound large subunit of the human ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

CGU(PSU)CA(PSU)AG

Length

9 nucleotides

Bulged bases

7OW7|1|A|U|4419, 7OW7|1|A|A|4422

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OW7_058 not in the Motif Atlas

Homologous match to HL_8C3A_062

Geometric discrepancy: 0.5277

The information below is about HL_8C3A_062

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_82661.1

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

7OW7|1|A|C|4417
7OW7|1|A|G|4418
7OW7|1|A|U|4419
7OW7|1|A|PSU|4420
7OW7|1|A|C|4421
7OW7|1|A|A|4422
7OW7|1|A|PSU|4423
7OW7|1|A|A|4424
7OW7|1|A|G|4425

Current chains

Chain A

28S rRNA

Nearby chains

Chain p

60S ribosomal protein L10-like