HL_7P7R_012

3D structure

PDB id

7P7R (explore in PDB, NAKB, or RNA 3D Hub)

Description

PoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state I

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

ACACGAGAAAU

Length

11 nucleotides

Bulged bases

7P7R|1|A|G|425

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7P7R_012 not in the Motif Atlas

Homologous match to HL_5J7L_145

Geometric discrepancy: 0.0976

The information below is about HL_5J7L_145

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91503.7

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

7P7R|1|A|A|421
7P7R|1|A|C|422
7P7R|1|A|A|423
7P7R|1|A|C|424
7P7R|1|A|G|425
7P7R|1|A|A|426
7P7R|1|A|G|427
7P7R|1|A|A|428
7P7R|1|A|A|429
7P7R|1|A|A|430
7P7R|1|A|U|431

Current chains

Chain A

23S rRNA

Nearby chains

Chain Z

50S ribosomal protein L28