HL_7P7U_041

3D structure

PDB id

7P7U (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. faecalis 70S ribosome with P-tRNA, state IV

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

AGAGUAU

Length

7 nucleotides

Bulged bases

7P7U|1|A|U|1676

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7P7U_041 not in the Motif Atlas

Homologous match to HL_5J7L_174

Geometric discrepancy: 0.1241

The information below is about HL_5J7L_174

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

7P7U|1|A|A|1672
7P7U|1|A|G|1673
7P7U|1|A|A|1674
7P7U|1|A|G|1675
7P7U|1|A|U|1676
7P7U|1|A|A|1677
7P7U|1|A|U|1678

Current chains

Chain A

23S rRNA

Nearby chains