HL_7P7U_099

3D structure

PDB id

7P7U (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. faecalis 70S ribosome with P-tRNA, state IV

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

AUUUAGUU

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7P7U_099 not in the Motif Atlas

Geometric match to HL_5TBW_024

Geometric discrepancy: 0.1544

The information below is about HL_5TBW_024

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_77436.2

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

23

Unit IDs

7P7U|1|a|A|1160
7P7U|1|a|U|1161
7P7U|1|a|U|1162
7P7U|1|a|U|1163
7P7U|1|a|A|1164
7P7U|1|a|G|1165
7P7U|1|a|U|1166
7P7U|1|a|U|1167

Current chains

Chain a

16S rRNA

Nearby chains

Chain j

30S ribosomal protein S9