HL_7PHC_098
3D structure
- PDB id
- 7PHC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with A*- and P/E-site tRNAs in chloramphenicol-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.9 Å
Loop
- Sequence
- AAUCAGCUAUGU
- Length
- 12 nucleotides
- Bulged bases
- 7PHC|1|5|U|1337, 7PHC|1|5|U|1339
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7PHC_098 not in the Motif Atlas
- Homologous match to HL_5J7L_029
- Geometric discrepancy: 0.3248
- The information below is about HL_5J7L_029
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_06226.4
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
7PHC|1|5|A|1330
7PHC|1|5|A|1331
7PHC|1|5|U|1332
7PHC|1|5|C|1333
7PHC|1|5|A|1334
7PHC|1|5|G|1335
7PHC|1|5|C|1336
7PHC|1|5|U|1337
7PHC|1|5|A|1338
7PHC|1|5|U|1339
7PHC|1|5|G|1340
7PHC|1|5|U|1341
Current chains
- Chain 5
- 16S ribosomal RNA
Nearby chains
- Chain H
- 30S ribosomal protein S9
- Chain I
- 30S ribosomal protein S10
- Chain L
- 30S ribosomal protein S13
- Chain M
- 30S ribosomal protein S14 type Z
- Chain R
- 30S ribosomal protein S19
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