HL_7PIB_005
3D structure
- PDB id
- 7PIB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with EF-G, A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- UGAAUAAAUAG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7PIB_005 not in the Motif Atlas
- Geometric match to HL_5J7L_138
- Geometric discrepancy: 0.2654
- The information below is about HL_5J7L_138
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_68257.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
7PIB|1|3|U|161
7PIB|1|3|G|162
7PIB|1|3|A|163
7PIB|1|3|A|164
7PIB|1|3|U|165
7PIB|1|3|A|166
7PIB|1|3|A|167
7PIB|1|3|A|168
7PIB|1|3|U|169
7PIB|1|3|A|170
7PIB|1|3|G|171
Current chains
- Chain 3
- 23S ribosomal RNA
Nearby chains
- Chain f
- 50S ribosomal protein L9
- Chain v
- 50S ribosomal protein L28
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