HL_7PIB_045
3D structure
- PDB id
- 7PIB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with EF-G, A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- UUUAACUAAAA
- Length
- 11 nucleotides
- Bulged bases
- 7PIB|1|3|A|1787, 7PIB|1|3|A|1788, 7PIB|1|3|C|1789, 7PIB|1|3|A|1793
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7PIB_045 not in the Motif Atlas
- Geometric match to HL_5TBW_046
- Geometric discrepancy: 0.2259
- The information below is about HL_5TBW_046
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_43613.6
- Basepair signature
- cWW-tWH-tWH-F
- Number of instances in this motif group
- 6
Unit IDs
7PIB|1|3|U|1784
7PIB|1|3|U|1785
7PIB|1|3|U|1786
7PIB|1|3|A|1787
7PIB|1|3|A|1788
7PIB|1|3|C|1789
7PIB|1|3|U|1790
7PIB|1|3|A|1791
7PIB|1|3|A|1792
7PIB|1|3|A|1793
7PIB|1|3|A|1794
Current chains
- Chain 3
- 23S ribosomal RNA
Nearby chains
- Chain 0
- 50S ribosomal protein L34
- Chain a
- 50S ribosomal protein L2
- Chain r
- 50S ribosomal protein L22
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