HL_7PIR_005
3D structure
- PDB id
- 7PIR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with A*- and P/E-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 12.1 Å
Loop
- Sequence
- UGAAUAAAUAG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7PIR_005 not in the Motif Atlas
- Homologous match to HL_5J7L_138
- Geometric discrepancy: 0.4197
- The information below is about HL_5J7L_138
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_68257.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
7PIR|1|3|U|161
7PIR|1|3|G|162
7PIR|1|3|A|163
7PIR|1|3|A|164
7PIR|1|3|U|165
7PIR|1|3|A|166
7PIR|1|3|A|167
7PIR|1|3|A|168
7PIR|1|3|U|169
7PIR|1|3|A|170
7PIR|1|3|G|171
Current chains
- Chain 3
- 23S ribosomal RNA
Nearby chains
- Chain f
- 50S ribosomal protein L9
- Chain v
- 50S ribosomal protein L28
Coloring options: