HL_7PIR_045
3D structure
- PDB id
- 7PIR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with A*- and P/E-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 12.1 Å
Loop
- Sequence
- UUUAACUAAAA
- Length
- 11 nucleotides
- Bulged bases
- 7PIR|1|3|A|1787, 7PIR|1|3|A|1788, 7PIR|1|3|C|1789, 7PIR|1|3|A|1793
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7PIR_045 not in the Motif Atlas
- Homologous match to HL_4WF9_043
- Geometric discrepancy: 0.3506
- The information below is about HL_4WF9_043
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_87681.1
- Basepair signature
- cWW-cWW-tWH-F-tWH-F-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
7PIR|1|3|U|1784
7PIR|1|3|U|1785
7PIR|1|3|U|1786
7PIR|1|3|A|1787
7PIR|1|3|A|1788
7PIR|1|3|C|1789
7PIR|1|3|U|1790
7PIR|1|3|A|1791
7PIR|1|3|A|1792
7PIR|1|3|A|1793
7PIR|1|3|A|1794
Current chains
- Chain 3
- 23S ribosomal RNA
Nearby chains
- Chain 0
- 50S ribosomal protein L34
- Chain a
- 50S ribosomal protein L2
- Chain r
- 50S ribosomal protein L22
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