HL_7PJZ_093

3D structure

PDB id

7PJZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S-EF-G-GDP ribosome complex with tRNAs in chimeric state 2 (CHI2-EF-G-GDP)

Experimental method

ELECTRON MICROSCOPY

Resolution

6 Å

Loop

Sequence

GUUAAGUC

Length

8 nucleotides

Bulged bases

7PJZ|1|a|G|1094

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7PJZ_093 not in the Motif Atlas

Homologous match to HL_5J7L_024

Geometric discrepancy: 0.1908

The information below is about HL_5J7L_024

Detailed Annotation

T-loop related

Broad Annotation

T-loop

Motif group

HL_77436.5

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

23

Unit IDs

7PJZ|1|a|G|1089
7PJZ|1|a|U|1090
7PJZ|1|a|U|1091
7PJZ|1|a|A|1092
7PJZ|1|a|A|1093
7PJZ|1|a|G|1094
7PJZ|1|a|U|1095
7PJZ|1|a|C|1096

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain b

30S ribosomal protein S2

Chain g

30S ribosomal protein S7

Chain u

30S ribosomal protein S21