HL_7PWO_019
3D structure
- PDB id
- 7PWO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of Giardia lamblia ribosome at 2.75 A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.75 Å
Loop
- Sequence
- ACGCGCAGAU
- Length
- 10 nucleotides
- Bulged bases
- 7PWO|1|1|C|595, 7PWO|1|1|G|599, 7PWO|1|1|A|600
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7PWO_019 not in the Motif Atlas
- Homologous match to HL_5TBW_020
- Geometric discrepancy: 0.0949
- The information below is about HL_5TBW_020
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_39334.8
- Basepair signature
- cWW-cWS-tSW-F-F
- Number of instances in this motif group
- 7
Unit IDs
7PWO|1|1|A|592
7PWO|1|1|C|593
7PWO|1|1|G|594
7PWO|1|1|C|595
7PWO|1|1|G|596
7PWO|1|1|C|597
7PWO|1|1|A|598
7PWO|1|1|G|599
7PWO|1|1|A|600
7PWO|1|1|U|601
Current chains
- Chain 1
- rRNA 28S
Nearby chains
- Chain B2
- Ribosomal protein L3
- Chain P2
- Ribosomal protein L17
- Chain j2
- Ribosomal protein L37
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