HL_7Q08_025

3D structure

PDB id

7Q08 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Candida albicans 80S ribosome in complex with cycloheximide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.56 Å

Loop

Sequence

CUUAAUUG

Length

8 nucleotides

Bulged bases

7Q08|1|1|U|1077

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7Q08_025 not in the Motif Atlas

Geometric match to HL_5TBW_024

Geometric discrepancy: 0.1395

The information below is about HL_5TBW_024

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_77436.2

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

23

Unit IDs

7Q08|1|1|C|1072
7Q08|1|1|U|1073
7Q08|1|1|U|1074
7Q08|1|1|A|1075
7Q08|1|1|A|1076
7Q08|1|1|U|1077
7Q08|1|1|U|1078
7Q08|1|1|G|1079

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain 2

Ribosomal 60S subunit protein L21A

Chain AC

60S ribosomal protein L29

Chain m

Ribosomal 60S subunit protein L5