HL_7QG8_050

3D structure

PDB id

7QG8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the collided E. coli disome - VemP-stalled 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.97 Å

Loop

Sequence

ACACGUGGUAU

Length

11 nucleotides

Bulged bases

7QG8|1|N|G|386, 7QG8|1|N|G|389

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QG8_050 not in the Motif Atlas

Homologous match to HL_5J7L_145

Geometric discrepancy: 0.1

The information below is about HL_5J7L_145

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91503.7

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

7QG8|1|N|A|382
7QG8|1|N|C|383
7QG8|1|N|A|384
7QG8|1|N|C|385
7QG8|1|N|G|386
7QG8|1|N|U|387
7QG8|1|N|G|388
7QG8|1|N|G|389
7QG8|1|N|U|390
7QG8|1|N|A|391
7QG8|1|N|U|392

Current chains

Chain N

23S rRNA

Nearby chains

Chain k

50S ribosomal protein L28