3D structure

PDB id
7QG8 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the collided E. coli disome - VemP-stalled 70S ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
3.97 Å

Loop

Sequence
AGAGAAU
Length
7 nucleotides
Bulged bases
7QG8|1|N|A|1634
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7QG8_079 not in the Motif Atlas
Homologous match to HL_5J7L_174
Geometric discrepancy: 0.0867
The information below is about HL_5J7L_174
Detailed Annotation
GNRA
Broad Annotation
No text annotation
Motif group
HL_37824.8
Basepair signature
cWW-F-F-F-F
Number of instances in this motif group
352

Unit IDs

7QG8|1|N|A|1630
7QG8|1|N|G|1631
7QG8|1|N|A|1632
7QG8|1|N|G|1633
7QG8|1|N|A|1634
7QG8|1|N|A|1635
7QG8|1|N|U|1636

Current chains

Chain N
23S rRNA

Nearby chains

No other chains within 10Å

Coloring options:


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