HL_7QGH_047

3D structure

PDB id

7QGH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli disome - collided 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.48 Å

Loop

Sequence

ACACGUGGUAU

Length

11 nucleotides

Bulged bases

7QGH|1|N|G|386, 7QGH|1|N|G|389

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QGH_047 not in the Motif Atlas

Homologous match to HL_5J7L_145

Geometric discrepancy: 0.1

The information below is about HL_5J7L_145

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91503.7

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

7QGH|1|N|A|382
7QGH|1|N|C|383
7QGH|1|N|A|384
7QGH|1|N|C|385
7QGH|1|N|G|386
7QGH|1|N|U|387
7QGH|1|N|G|388
7QGH|1|N|G|389
7QGH|1|N|U|390
7QGH|1|N|A|391
7QGH|1|N|U|392

Current chains

Chain N

23S rRNA

Nearby chains

Chain k

50S ribosomal protein L28