3D structure

PDB id
7QGU (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the B. subtilis disome - stalled 70S ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
4.75 Å

Loop

Sequence
GAUCAGCAUGC
Length
11 nucleotides
Bulged bases
7QGU|1|W|U|1373
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7QGU_102 not in the Motif Atlas
Homologous match to HL_5J7L_029
Geometric discrepancy: 0.2003
The information below is about HL_5J7L_029
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_06226.4
Basepair signature
cWW-F-F-F-F-F-F-F
Number of instances in this motif group
4

Unit IDs

7QGU|1|W|G|1365
7QGU|1|W|A|1366
7QGU|1|W|U|1367
7QGU|1|W|C|1368
7QGU|1|W|A|1369
7QGU|1|W|G|1370
7QGU|1|W|C|1371
7QGU|1|W|A|1372
7QGU|1|W|U|1373
7QGU|1|W|G|1374
7QGU|1|W|C|1375

Current chains

Chain W
16S rRNA

Nearby chains

Chain n
30S ribosomal protein S9
Chain o
30S ribosomal protein S10
Chain s
30S ribosomal protein S14 type Z

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