HL_7QP6_026
3D structure
- PDB id
- 7QP6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the human 48S initiation complex in open state (h48S AUG open)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- GACUCAACAC
- Length
- 10 nucleotides
- Bulged bases
- 7QP6|1|A|A|1253
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7QP6_026 not in the Motif Atlas
- Geometric match to HL_4V88_212
- Geometric discrepancy: 0.186
- The information below is about HL_4V88_212
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50779.1
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
7QP6|1|A|G|1245
7QP6|1|A|A|1246
7QP6|1|A|C|1247
7QP6|1|A|U|1248
7QP6|1|A|C|1249
7QP6|1|A|A|1250
7QP6|1|A|A|1251
7QP6|1|A|C|1252
7QP6|1|A|A|1253
7QP6|1|A|C|1254
Current chains
- Chain A
- 18S rRNA
Nearby chains
- Chain Y
- 40S ribosomal protein S16
- Chain h
- 40S ribosomal protein S20
- Chain i
- 40S ribosomal protein S29
- Chain w
- Transfer RNA; tRNA
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