HL_7QV3_039

3D structure

PDB id

7QV3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (MutS2 conf.2; Leading 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.14 Å

Loop

Sequence

CGAAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QV3_039 not in the Motif Atlas

Homologous match to HL_5J7L_167

Geometric discrepancy: 0.1253

The information below is about HL_5J7L_167

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

7QV3|1|V|C|1402
7QV3|1|V|G|1403
7QV3|1|V|A|1404
7QV3|1|V|A|1405
7QV3|1|V|A|1406
7QV3|1|V|G|1407

Current chains

Chain V

23S ribosomal RNA

Nearby chains

Chain 2

50S ribosomal protein L34

Chain u

50S ribosomal protein L28