3D structure

PDB id
7QV3 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Bacillus subtilis MutS2-collided disome complex (MutS2 conf.2; Leading 70S)
Experimental method
ELECTRON MICROSCOPY
Resolution
5.14 Å

Loop

Sequence
GAUUAGAUACC
Length
11 nucleotides
Bulged bases
7QV3|1|a|U|802
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7QV3_090 not in the Motif Atlas
Homologous match to HL_5J7L_017
Geometric discrepancy: 0.1582
The information below is about HL_5J7L_017
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_75293.5
Basepair signature
cWW-F-F-F-F-F-F-F-F
Number of instances in this motif group
11

Unit IDs

7QV3|1|a|G|795
7QV3|1|a|A|796
7QV3|1|a|U|797
7QV3|1|a|U|798
7QV3|1|a|A|799
7QV3|1|a|G|800
7QV3|1|a|A|801
7QV3|1|a|U|802
7QV3|1|a|A|803
7QV3|1|a|C|804
7QV3|1|a|C|805

Current chains

Chain a
16S ribosomal RNA

Nearby chains

Chain A
mRNA
Chain H
Transfer RNA; tRNA
Chain V
Large subunit ribosomal RNA; LSU rRNA
Chain b
30S ribosomal protein S21
Chain k
30S ribosomal protein S11

Coloring options:


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