HL_7QWQ_053

3D structure

PDB id

7QWQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ternary complex of ribosome nascent chain with SRP and NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.83 Å

Loop

Sequence

UCUAAUUAG

Length

9 nucleotides

Bulged bases

7QWQ|1|5|U|3802

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QWQ_053 not in the Motif Atlas

Homologous match to HL_8C3A_050

Geometric discrepancy: 0.1221

The information below is about HL_8C3A_050

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_27115.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

22

Unit IDs

7QWQ|1|5|U|3796
7QWQ|1|5|C|3797
7QWQ|1|5|U|3798
7QWQ|1|5|A|3799
7QWQ|1|5|A|3800
7QWQ|1|5|U|3801
7QWQ|1|5|U|3802
7QWQ|1|5|A|3803
7QWQ|1|5|G|3804

Current chains

Chain 5

28S rRNA

Nearby chains

Chain V

Ribosomal protein L23