HL_7QWQ_064

3D structure

PDB id

7QWQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ternary complex of ribosome nascent chain with SRP and NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.83 Å

Loop

Sequence

CGUUCAUAG

Length

9 nucleotides

Bulged bases

7QWQ|1|5|U|4419

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QWQ_064 not in the Motif Atlas

Homologous match to HL_8C3A_062

Geometric discrepancy: 0.1831

The information below is about HL_8C3A_062

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_82661.1

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

7QWQ|1|5|C|4417
7QWQ|1|5|G|4418
7QWQ|1|5|U|4419
7QWQ|1|5|U|4420
7QWQ|1|5|C|4421
7QWQ|1|5|A|4422
7QWQ|1|5|U|4423
7QWQ|1|5|A|4424
7QWQ|1|5|G|4425

Current chains

Chain 5

28S rRNA

Nearby chains

Chain I

60S ribosomal protein L10

Chain m

Ubiquitin A-52 residue ribosomal protein fusion product 1