HL_7S0S_070

3D structure

PDB id

7S0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. tuberculosis ribosomal RNA methyltransferase TlyA bound to M. smegmatis 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.05 Å

Loop

Sequence

CUGAAAGCAUCUAAG

Length

15 nucleotides

Bulged bases

7S0S|1|C|G|2975, 7S0S|1|C|C|2979

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7S0S_070 not in the Motif Atlas

Homologous match to HL_7RQB_066

Geometric discrepancy: 0.1187

The information below is about HL_7RQB_066

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_56677.7

Basepair signature

cWW-tWH-tSH-cWH-tSH-tHW-tHW-tSW

Number of instances in this motif group

8

Unit IDs

7S0S|1|C|C|2969
7S0S|1|C|U|2970
7S0S|1|C|G|2971
7S0S|1|C|A|2972
7S0S|1|C|A|2973
7S0S|1|C|A|2974
7S0S|1|C|G|2975
7S0S|1|C|C|2976
7S0S|1|C|A|2977
7S0S|1|C|U|2978
7S0S|1|C|C|2979
7S0S|1|C|U|2980
7S0S|1|C|A|2981
7S0S|1|C|A|2982
7S0S|1|C|G|2983

Current chains

Chain C

23S rRNA

Nearby chains

Chain H

50S ribosomal protein L6

Chain g

50S ribosomal protein L36