HL_7S1H_044

3D structure

PDB id

7S1H (explore in PDB, NAKB, or RNA 3D Hub)

Description

Wild-type Escherichia coli ribosome with antibiotic linezolid

Experimental method

ELECTRON MICROSCOPY

Resolution

2.35 Å

Loop

Sequence

ACACGUGGUAU

Length

11 nucleotides

Bulged bases

7S1H|1|I|G|386, 7S1H|1|I|G|389

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7S1H_044 not in the Motif Atlas

Homologous match to HL_5J7L_145

Geometric discrepancy: 0.1022

The information below is about HL_5J7L_145

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91503.7

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

7S1H|1|I|A|382
7S1H|1|I|C|383
7S1H|1|I|A|384
7S1H|1|I|C|385
7S1H|1|I|G|386
7S1H|1|I|U|387
7S1H|1|I|G|388
7S1H|1|I|G|389
7S1H|1|I|U|390
7S1H|1|I|A|391
7S1H|1|I|U|392

Current chains

Chain I

23S rRNA

Nearby chains

Chain f

50S ribosomal protein L28