HL_7S1H_109

3D structure

PDB id

7S1H (explore in PDB, NAKB, or RNA 3D Hub)

Description

Wild-type Escherichia coli ribosome with antibiotic linezolid

Experimental method

ELECTRON MICROSCOPY

Resolution

2.35 Å

Loop

Sequence

UUUA

Length

4 nucleotides

Bulged bases

7S1H|1|I|U|2797

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7S1H_109 not in the Motif Atlas

Geometric match to HL_5F9R_002

Geometric discrepancy: 0.1989

The information below is about HL_5F9R_002

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_48778.2

Basepair signature

cWW-F

Number of instances in this motif group

46

Unit IDs

7S1H|1|I|U|2796
7S1H|1|I|U|2797
7S1H|1|I|U|2798
7S1H|1|I|A|2799

Current chains

Chain I

23S rRNA

Nearby chains