HL_7SUK_005
3D structure
- PDB id
- 7SUK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Bfr2-Lcp5 Complex Observed in the Small Subunit Processome Isolated from R2TP-depleted Yeast Cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.99 Å
Loop
- Sequence
- GAUAGUGGC
- Length
- 9 nucleotides
- Bulged bases
- 7SUK|1|8|G|337
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7SUK_005 not in the Motif Atlas
- Geometric match to HL_4LFB_006
- Geometric discrepancy: 0.1638
- The information below is about HL_4LFB_006
- Detailed Annotation
- GNRA related
- Broad Annotation
- GNRA related
- Motif group
- HL_87268.2
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 15
Unit IDs
7SUK|1|8|G|330
7SUK|1|8|A|331
7SUK|1|8|U|332
7SUK|1|8|A|333
7SUK|1|8|G|334
7SUK|1|8|U|335
7SUK|1|8|G|336
7SUK|1|8|G|337
7SUK|1|8|C|338
Current chains
- Chain 8
- 18S pre-rRNA
Nearby chains
- Chain 5
- Protein BFR2
- Chain L8
- 40S ribosomal protein S8-A
- Chain LD
- 40S ribosomal protein S11-A
- Chain LV
- Ribosome biogenesis protein ENP2
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