HL_7SUK_011
3D structure
- PDB id
- 7SUK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Bfr2-Lcp5 Complex Observed in the Small Subunit Processome Isolated from R2TP-depleted Yeast Cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.99 Å
Loop
- Sequence
- AAUGUAAAUACCU
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7SUK_011 not in the Motif Atlas
- Homologous match to HL_8C3A_205
- Geometric discrepancy: 0.3928
- The information below is about HL_8C3A_205
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_05304.2
- Basepair signature
- cWW-cWW-F-F-tSH-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
7SUK|1|8|A|520
7SUK|1|8|A|521
7SUK|1|8|U|522
7SUK|1|8|G|523
7SUK|1|8|U|524
7SUK|1|8|A|525
7SUK|1|8|A|526
7SUK|1|8|A|527
7SUK|1|8|U|528
7SUK|1|8|A|529
7SUK|1|8|C|530
7SUK|1|8|C|531
7SUK|1|8|U|532
Current chains
- Chain 8
- 18S pre-rRNA
Nearby chains
- Chain 6
- U3 small nucleolar ribonucleoprotein protein LCP5
- Chain L9
- 40S ribosomal protein S9-A
- Chain LF
- 40S ribosomal protein S24-A
- Chain SI
- Ribosome biogenesis protein BMS1
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