HL_7TOQ_065

3D structure

PDB id

7TOQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein poly-PR

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UGUAACAA

Length

8 nucleotides

Bulged bases

7TOQ|1|A25S|A|2009

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7TOQ_065 not in the Motif Atlas

Homologous match to HL_8C3A_028

Geometric discrepancy: 0.4537

The information below is about HL_8C3A_028

Detailed Annotation

GNRA wlth tandem sheared

Broad Annotation

No text annotation

Motif group

HL_27115.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

22

Unit IDs

7TOQ|1|A25S|U|2006
7TOQ|1|A25S|G|2007
7TOQ|1|A25S|U|2008
7TOQ|1|A25S|A|2009
7TOQ|1|A25S|A|2010
7TOQ|1|A25S|C|2011
7TOQ|1|A25S|A|2012
7TOQ|1|A25S|A|2013

Current chains

Chain A25S

28S rRNA

Nearby chains