HL_7TOS_043
3D structure
- PDB id
- 7TOS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosomes bound with the ALS/FTD-associated dipeptide repeat protein PR20
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- ACACGUGGUAU
- Length
- 11 nucleotides
- Bulged bases
- 7TOS|1|23S|G|386, 7TOS|1|23S|G|389
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7TOS_043 not in the Motif Atlas
- Geometric match to HL_5J7L_145
- Geometric discrepancy: 0.1741
- The information below is about HL_5J7L_145
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_91503.7
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
7TOS|1|23S|A|382
7TOS|1|23S|C|383
7TOS|1|23S|A|384
7TOS|1|23S|C|385
7TOS|1|23S|G|386
7TOS|1|23S|U|387
7TOS|1|23S|G|388
7TOS|1|23S|G|389
7TOS|1|23S|U|390
7TOS|1|23S|A|391
7TOS|1|23S|U|392
Current chains
- Chain 23S
- 23S ribosomal RNA
Nearby chains
- Chain L28
- 50S ribosomal protein L28
- Chain L35
- 50S ribosomal protein L35
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