HL_7UNU_028

3D structure

PDB id

7UNU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-B)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CUUAGAAGCAG

Length

11 nucleotides

Bulged bases

7UNU|1|A|A|1060

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UNU_028 not in the Motif Atlas

Geometric match to HL_5D8H_001

Geometric discrepancy: 0.1001

The information below is about HL_5D8H_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_20174.1

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

5

Unit IDs

7UNU|1|A|C|1054
7UNU|1|A|U|1055
7UNU|1|A|U|1056
7UNU|1|A|A|1057
7UNU|1|A|G|1058
7UNU|1|A|A|1059
7UNU|1|A|A|1060
7UNU|1|A|G|1061
7UNU|1|A|C|1062
7UNU|1|A|A|1063
7UNU|1|A|G|1064

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain J

50S ribosomal protein L11

Chain x

Translation initiation factor IF-2