HL_7UNV_029
3D structure
- PDB id
- 7UNV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-A)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- CGUAAUAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7UNV_029 not in the Motif Atlas
- Geometric match to HL_6PRV_002
- Geometric discrepancy: 0.1538
- The information below is about HL_6PRV_002
- Detailed Annotation
- GNRA wlth tandem sheared
- Broad Annotation
- No text annotation
- Motif group
- HL_81538.2
- Basepair signature
- cWW-tSH-F-F-F-F
- Number of instances in this motif group
- 16
Unit IDs
7UNV|1|A|C|1082
7UNV|1|A|G|1083
7UNV|1|A|U|1084
7UNV|1|A|A|1085
7UNV|1|A|A|1086
7UNV|1|A|U|1087
7UNV|1|A|A|1088
7UNV|1|A|G|1089
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain G
- 50S ribosomal protein L6
- Chain J
- 50S ribosomal protein L11
- Chain x
- Translation initiation factor IF-2
Coloring options: