HL_7UPH_075
3D structure
- PDB id
- 7UPH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a ribosome with tethered subunits
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.18 Å
Loop
- Sequence
- UUUAUUAAAAA
- Length
- 11 nucleotides
- Bulged bases
- 7UPH|1|I|A|3274, 7UPH|1|I|U|3275, 7UPH|1|I|U|3276, 7UPH|1|I|A|3280
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7UPH_075 not in the Motif Atlas
- Geometric match to HL_4WF9_043
- Geometric discrepancy: 0.2392
- The information below is about HL_4WF9_043
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_01962.2
- Basepair signature
- cWW-tWH-tWH-F
- Number of instances in this motif group
- 6
Unit IDs
7UPH|1|I|U|3271
7UPH|1|I|U|3272
7UPH|1|I|U|3273
7UPH|1|I|A|3274
7UPH|1|I|U|3275
7UPH|1|I|U|3276
7UPH|1|I|A|3277
7UPH|1|I|A|3278
7UPH|1|I|A|3279
7UPH|1|I|A|3280
7UPH|1|I|A|3281
Current chains
- Chain I
- Tethered rRNA
Nearby chains
- Chain K
- 50S ribosomal protein L2
- Chain k
- 50S ribosomal protein L34
Coloring options: