HL_7WTV_024

3D structure

PDB id

7WTV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a human pre-40S ribosomal subunit - State RRP12-A2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GUUAAUUC

Length

8 nucleotides

Bulged bases

7WTV|1|2|U|1371

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7WTV_024 not in the Motif Atlas

Geometric match to HL_5TBW_024

Geometric discrepancy: 0.2868

The information below is about HL_5TBW_024

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_77436.2

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

23

Unit IDs

7WTV|1|2|G|1366
7WTV|1|2|U|1367
7WTV|1|2|U|1368
7WTV|1|2|A|1369
7WTV|1|2|A|1370
7WTV|1|2|U|1371
7WTV|1|2|U|1372
7WTV|1|2|C|1373

Current chains

Chain 2

18S rRNA

Nearby chains

Chain K

RRP12-like protein