HL_7Z34_048
3D structure
- PDB id
- 7Z34 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of pre-60S particle bound to DRG1(AFG2)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- UCUAAUUAAAA
- Length
- 11 nucleotides
- Bulged bases
- 7Z34|1|1|A|2138, 7Z34|1|1|A|2139, 7Z34|1|1|U|2140, 7Z34|1|1|A|2144
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7Z34_048 not in the Motif Atlas
- Homologous match to HL_8C3A_046
- Geometric discrepancy: 0.1855
- The information below is about HL_8C3A_046
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_43613.6
- Basepair signature
- cWW-tWH-tWH-F
- Number of instances in this motif group
- 6
Unit IDs
7Z34|1|1|U|2135
7Z34|1|1|C|2136
7Z34|1|1|U|2137
7Z34|1|1|A|2138
7Z34|1|1|A|2139
7Z34|1|1|U|2140
7Z34|1|1|U|2141
7Z34|1|1|A|2142
7Z34|1|1|A|2143
7Z34|1|1|A|2144
7Z34|1|1|A|2145
Current chains
- Chain 1
- 35S pre-ribosomal RNA
Nearby chains
- Chain A
- 60S ribosomal protein L2-A
- Chain b
- Nucleolar GTP-binding protein 1
- Chain j
- 60S ribosomal protein L37-A
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