3D structure

PDB id
7Z3O (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation
Experimental method
ELECTRON MICROSCOPY
Resolution
3.3 Å

Loop

Sequence
UUUGGGAAUG
Length
10 nucleotides
Bulged bases
7Z3O|1|1|G|276, 7Z3O|1|1|A|277, 7Z3O|1|1|A|278
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7Z3O_008 not in the Motif Atlas
Homologous match to HL_5TBW_008
Geometric discrepancy: 0.148
The information below is about HL_5TBW_008
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_77436.2
Basepair signature
cWW-F-F-F-F-F
Number of instances in this motif group
23

Unit IDs

7Z3O|1|1|U|271
7Z3O|1|1|U|272
7Z3O|1|1|U|273
7Z3O|1|1|G|274
7Z3O|1|1|G|275
7Z3O|1|1|G|276
7Z3O|1|1|A|277
7Z3O|1|1|A|278
7Z3O|1|1|U|279
7Z3O|1|1|G|280

Current chains

Chain 1
26S rRNA

Nearby chains

Chain LL
60S ribosomal protein L13
Chain LN
Ribosomal protein L15
Chain La
60S ribosomal protein L28-like protein
Chain Lo
60S ribosomal protein L44-like protein

Coloring options:


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