HL_7Z3O_123

3D structure

PDB id

7Z3O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

AUUGAGAGCU

Length

10 nucleotides

Bulged bases

7Z3O|1|2|G|1240, 7Z3O|1|2|G|1242

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7Z3O_123 not in the Motif Atlas

Homologous match to HL_8C3A_218

Geometric discrepancy: 0.2562

The information below is about HL_8C3A_218

Detailed Annotation

Anticodon loop related

Broad Annotation

Anticodon loop related

Motif group

HL_81538.1

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

15

Unit IDs

7Z3O|1|2|A|1235
7Z3O|1|2|U|1236
7Z3O|1|2|U|1237
7Z3O|1|2|G|1238
7Z3O|1|2|A|1239
7Z3O|1|2|G|1240
7Z3O|1|2|A|1241
7Z3O|1|2|G|1242
7Z3O|1|2|C|1243
7Z3O|1|2|U|1244

Current chains

Chain 2

18S rRNA

Nearby chains

Chain SP

40S ribosomal protein s15-like protein

Chain Sd

Ribosomal protein uS14

Chain Sf

40S ribosomal protein S27a-like protein