HL_7ZPQ_057
3D structure
- PDB id
- 7ZPQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the RQT-bound 80S ribosome from S. cerevisiae (C1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.47 Å
Loop
- Sequence
- GUGUAAAAC
- Length
- 9 nucleotides
- Bulged bases
- 7ZPQ|1|5|U|689, 7ZPQ|1|5|A|691
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7ZPQ_057 not in the Motif Atlas
- Homologous match to HL_8C3A_015
- Geometric discrepancy: 0.0913
- The information below is about HL_8C3A_015
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_53971.1
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
7ZPQ|1|5|G|686
7ZPQ|1|5|U|687
7ZPQ|1|5|G|688
7ZPQ|1|5|U|689
7ZPQ|1|5|A|690
7ZPQ|1|5|A|691
7ZPQ|1|5|A|692
7ZPQ|1|5|A|693
7ZPQ|1|5|C|694
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain 3
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain BC
- RPL4A isoform 1
- Chain BK
- 60S ribosomal protein L13-A
- Chain BM
- 60S ribosomal protein L15-A
- Chain BX
- 60S ribosomal protein L26-A
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