3D structure

PDB id
7ZQ5 (explore in PDB, NAKB, or RNA 3D Hub)
Description
70S E. coli ribosome with truncated uL23 and uL24 loops
Experimental method
ELECTRON MICROSCOPY
Resolution
2.7 Å

Loop

Sequence
UUUAUUAAAAA
Length
11 nucleotides
Bulged bases
7ZQ5|1|b|A|1780, 7ZQ5|1|b|U|1781, 7ZQ5|1|b|U|1782, 7ZQ5|1|b|A|1786
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7ZQ5_047 not in the Motif Atlas
Geometric match to HL_7RQB_045
Geometric discrepancy: 0.0751
The information below is about HL_7RQB_045
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_43613.5
Basepair signature
cWW-tWH-tWH-F
Number of instances in this motif group
6

Unit IDs

7ZQ5|1|b|U|1777
7ZQ5|1|b|U|1778
7ZQ5|1|b|U|1779
7ZQ5|1|b|A|1780
7ZQ5|1|b|U|1781
7ZQ5|1|b|U|1782
7ZQ5|1|b|A|1783
7ZQ5|1|b|A|1784
7ZQ5|1|b|A|1785
7ZQ5|1|b|A|1786
7ZQ5|1|b|A|1787

Current chains

Chain b
23S rRNA

Nearby chains

Chain 6
50S ribosomal protein L34
Chain c
50S ribosomal protein L2

Coloring options:


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