HL_7ZQ6_017

3D structure

PDB id

7ZQ6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S E. coli ribosome with truncated uL23 and uL24 loops and a stalled filamin domain 5 nascent chain

Experimental method

ELECTRON MICROSCOPY

Resolution

2.75 Å

Loop

Sequence

ACACGUGGUAU

Length

11 nucleotides

Bulged bases

7ZQ6|1|b|G|386, 7ZQ6|1|b|G|389

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZQ6_017 not in the Motif Atlas

Geometric match to HL_5J7L_145

Geometric discrepancy: 0.0873

The information below is about HL_5J7L_145

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91503.7

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

7ZQ6|1|b|A|382
7ZQ6|1|b|C|383
7ZQ6|1|b|A|384
7ZQ6|1|b|C|385
7ZQ6|1|b|G|386
7ZQ6|1|b|U|387
7ZQ6|1|b|G|388
7ZQ6|1|b|G|389
7ZQ6|1|b|U|390
7ZQ6|1|b|A|391
7ZQ6|1|b|U|392

Current chains

Chain b

23S rRNA

Nearby chains

Chain 0

50S ribosomal protein L28