HL_7ZUW_062

3D structure

PDB id

7ZUW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of RQT (C1) bound to the stalled ribosome in a disome unit from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

4.3 Å

Loop

Sequence

ACGUGCAAAU

Length

10 nucleotides

Bulged bases

7ZUW|1|5|U|880, 7ZUW|1|5|A|884

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZUW_062 not in the Motif Atlas

Homologous match to HL_8C3A_020

Geometric discrepancy: 0.0819

The information below is about HL_8C3A_020

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_39334.8

Basepair signature

cWW-cWS-tSW-F-F

Number of instances in this motif group

7

Unit IDs

7ZUW|1|5|A|877
7ZUW|1|5|C|878
7ZUW|1|5|G|879
7ZUW|1|5|U|880
7ZUW|1|5|G|881
7ZUW|1|5|C|882
7ZUW|1|5|A|883
7ZUW|1|5|A|884
7ZUW|1|5|A|885
7ZUW|1|5|U|886

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain BB

60S ribosomal protein L3

Chain BO

60S ribosomal protein L17-A

Chain Bi

60S ribosomal protein L37-A