HL_8BQD_030
3D structure
- PDB id
- 8BQD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome in complex with Map1 (conformation 1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CUUAAUUG
- Length
- 8 nucleotides
- Bulged bases
- 8BQD|1|2|U|1314
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8BQD_030 not in the Motif Atlas
- Homologous match to HL_4V88_215
- Geometric discrepancy: 0.1312
- The information below is about HL_4V88_215
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_77436.2
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 23
Unit IDs
8BQD|1|2|C|1309
8BQD|1|2|U|1310
8BQD|1|2|U|1311
8BQD|1|2|A|1312
8BQD|1|2|A|1313
8BQD|1|2|U|1314
8BQD|1|2|U|1315
8BQD|1|2|G|1316
Current chains
- Chain 2
- 18S rRNA
Nearby chains
- Chain G
- 40S ribosomal protein S17-A
Coloring options: